Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
NKX6-1P78426 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 BX842568.4-201ENST00000421222 227 ntBASIC15.53■□□□□ 0.08
NKX6-1P78426 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NKX6-1P78426 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.53■□□□□ 0.08
NKX6-1P78426 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NKX6-1P78426 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX6-1P78426 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NKX6-1P78426 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-1P78426 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 ZNF259P1-201ENST00000407656 1365 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-1P78426 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.52■□□□□ 0.08
NKX6-1P78426 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
NKX6-1P78426 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.52■□□□□ 0.08
NKX6-1P78426 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-1P78426 RPL13AP23-201ENST00000480739 586 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 AC091607.1-201ENST00000490318 1060 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.52■□□□□ 0.08
NKX6-1P78426 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-1P78426 MIR5100-201ENST00000579544 119 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.52■□□□□ 0.08
NKX6-1P78426 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.52■□□□□ 0.08
NKX6-1P78426 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 AC148477.8-201ENST00000624298 468 ntBASIC15.52■□□□□ 0.08
NKX6-1P78426 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NKX6-1P78426 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.52■□□□□ 0.07
NKX6-1P78426 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 AC093677.2-201ENST00000600169 1863 ntBASIC15.52■□□□□ 0.07
NKX6-1P78426 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NKX6-1P78426 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
NKX6-1P78426 AC090164.3-201ENST00000610780 2143 ntBASIC15.52■□□□□ 0.07
NKX6-1P78426 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.52■□□□□ 0.07
NKX6-1P78426 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-1P78426 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.51■□□□□ 0.07
NKX6-1P78426 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.51■□□□□ 0.07
NKX6-1P78426 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.51■□□□□ 0.07
NKX6-1P78426 AC008608.2-201ENST00000606089 416 ntBASIC15.51■□□□□ 0.07
NKX6-1P78426 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-1P78426 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-1P78426 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-1P78426 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms