Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 PCED1CP-201ENST00000419887 785 ntBASIC14.23□□□□□ -0.13
CX3CL1P78423 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.23□□□□□ -0.13
CX3CL1P78423 AL445228.2-201ENST00000605589 952 ntBASIC14.23□□□□□ -0.13
CX3CL1P78423 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CX3CL1P78423 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.23□□□□□ -0.13
CX3CL1P78423 AC100803.2-201ENST00000562459 1963 ntBASIC14.23□□□□□ -0.13
CX3CL1P78423 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 AC080080.1-201ENST00000625121 2420 ntBASIC14.23□□□□□ -0.13
CX3CL1P78423 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.23□□□□□ -0.13
CX3CL1P78423 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CX3CL1P78423 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 AC068472.1-201ENST00000474589 881 ntBASIC14.22□□□□□ -0.13
CX3CL1P78423 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 GUSBP12-201ENST00000513727 720 ntBASIC14.22□□□□□ -0.13
CX3CL1P78423 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 KRT8P26-201ENST00000534154 1276 ntBASIC14.22□□□□□ -0.13
CX3CL1P78423 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.22□□□□□ -0.13
CX3CL1P78423 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CX3CL1P78423 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CX3CL1P78423 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CX3CL1P78423 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
CX3CL1P78423 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.21□□□□□ -0.13
CX3CL1P78423 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.21□□□□□ -0.13
CX3CL1P78423 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CX3CL1P78423 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 MTCL1P1-201ENST00000446207 792 ntBASIC14.21□□□□□ -0.13
CX3CL1P78423 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.21□□□□□ -0.13
CX3CL1P78423 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms