Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.78■□□□□ 0.44
PRAMEP78395 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 AL031133.1-201ENST00000406807 723 ntBASIC17.78■□□□□ 0.44
PRAMEP78395 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.78■□□□□ 0.44
PRAMEP78395 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEP78395 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEP78395 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.78■□□□□ 0.44
PRAMEP78395 LINC01451-201ENST00000623792 534 ntBASIC17.78■□□□□ 0.44
PRAMEP78395 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.78■□□□□ 0.44
PRAMEP78395 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PRAMEP78395 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 HLA-J-201ENST00000462773 1622 ntBASIC17.78■□□□□ 0.44
PRAMEP78395 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEP78395 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEP78395 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PRAMEP78395 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEP78395 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PRAMEP78395 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.77■□□□□ 0.44
PRAMEP78395 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.77■□□□□ 0.44
PRAMEP78395 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.77■□□□□ 0.44
PRAMEP78395 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRAMEP78395 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.77■□□□□ 0.44
PRAMEP78395 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 AL590326.2-201ENST00000625139 305 ntBASIC17.77■□□□□ 0.44
PRAMEP78395 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
PRAMEP78395 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRAMEP78395 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PRAMEP78395 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.77■□□□□ 0.43
PRAMEP78395 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.77■□□□□ 0.43
PRAMEP78395 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.77■□□□□ 0.43
PRAMEP78395 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRAMEP78395 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 AC009053.2-201ENST00000563701 2365 ntBASIC17.76■□□□□ 0.43
PRAMEP78395 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
PRAMEP78395 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.76■□□□□ 0.43
PRAMEP78395 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PRAMEP78395 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.76■□□□□ 0.43
PRAMEP78395 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
PRAMEP78395 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.76■□□□□ 0.43
PRAMEP78395 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PRAMEP78395 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
PRAMEP78395 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEP78395 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PRAMEP78395 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.75■□□□□ 0.43
PRAMEP78395 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.75■□□□□ 0.43
PRAMEP78395 KRT8P26-201ENST00000534154 1276 ntBASIC17.75■□□□□ 0.43
PRAMEP78395 AC087388.1-201ENST00000571370 1112 ntBASIC17.75■□□□□ 0.43
PRAMEP78395 AC090616.6-201ENST00000582640 721 ntBASIC17.75■□□□□ 0.43
PRAMEP78395 AL592071.1-201ENST00000611956 408 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms