Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.13■□□□□ 0.17
CDC42P60953 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDC42P60953 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
CDC42P60953 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.12■□□□□ 0.17
CDC42P60953 SLC25A1P2-201ENST00000430693 912 ntBASIC16.12■□□□□ 0.17
CDC42P60953 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 AL353719.1-201ENST00000566847 864 ntBASIC16.12■□□□□ 0.17
CDC42P60953 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.12■□□□□ 0.17
CDC42P60953 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC42P60953 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDC42P60953 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC42P60953 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC42P60953 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 KRT18P29-201ENST00000397031 1267 ntBASIC16.11■□□□□ 0.17
CDC42P60953 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.11■□□□□ 0.17
CDC42P60953 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 AL023803.3-201ENST00000615559 522 ntBASIC16.11■□□□□ 0.17
CDC42P60953 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 FAM197Y4-202ENST00000622692 608 ntBASIC16.11■□□□□ 0.17
CDC42P60953 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDC42P60953 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC42P60953 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC42P60953 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms