Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CASP6P55212 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.82■□□□□ 0.12
CASP6P55212 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.82■□□□□ 0.12
CASP6P55212 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.82■□□□□ 0.12
CASP6P55212 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 AC211486.1-202ENST00000416371 468 ntBASIC15.82■□□□□ 0.12
CASP6P55212 AC211476.1-201ENST00000503899 468 ntBASIC15.82■□□□□ 0.12
CASP6P55212 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.82■□□□□ 0.12
CASP6P55212 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 AC064836.3-201ENST00000607928 673 ntBASIC15.82■□□□□ 0.12
CASP6P55212 AL589182.2-201ENST00000619332 1049 ntBASIC15.82■□□□□ 0.12
CASP6P55212 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 AC134684.3-201ENST00000641758 218 ntBASIC15.82■□□□□ 0.12
CASP6P55212 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CASP6P55212 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CASP6P55212 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.82■□□□□ 0.12
CASP6P55212 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CASP6P55212 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CASP6P55212 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.81■□□□□ 0.12
CASP6P55212 AC023274.1-201ENST00000418278 595 ntBASIC15.81■□□□□ 0.12
CASP6P55212 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.81■□□□□ 0.12
CASP6P55212 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.81■□□□□ 0.12
CASP6P55212 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.81■□□□□ 0.12
CASP6P55212 AC005332.7-201ENST00000614046 2005 ntBASIC15.81■□□□□ 0.12
CASP6P55212 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CASP6P55212 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CASP6P55212 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASP6P55212 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP6P55212 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP6P55212 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP6P55212 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASP6P55212 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.8■□□□□ 0.12
CASP6P55212 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
CASP6P55212 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 CRYGEP-201ENST00000412192 528 ntBASIC15.8■□□□□ 0.12
CASP6P55212 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.8■□□□□ 0.12
CASP6P55212 AL020989.1-201ENST00000422979 469 ntBASIC15.8■□□□□ 0.12
CASP6P55212 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 AC073592.4-201ENST00000623827 446 ntBASIC15.8■□□□□ 0.12
CASP6P55212 AC073592.5-201ENST00000624854 528 ntBASIC15.8■□□□□ 0.12
CASP6P55212 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CASP6P55212 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASP6P55212 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CASP6P55212 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASP6P55212 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASP6P55212 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms