Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.83■□□□□ 0.6
RAD23BP54727 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.83■□□□□ 0.6
RAD23BP54727 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.83■□□□□ 0.6
RAD23BP54727 PRORSD1P-202ENST00000563365 2154 ntBASIC18.83■□□□□ 0.6
RAD23BP54727 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.83■□□□□ 0.6
RAD23BP54727 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.83■□□□□ 0.6
RAD23BP54727 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.83■□□□□ 0.6
RAD23BP54727 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.83■□□□□ 0.6
RAD23BP54727 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAD23BP54727 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RAD23BP54727 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.82■□□□□ 0.6
RAD23BP54727 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.82■□□□□ 0.6
RAD23BP54727 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAD23BP54727 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 NUS1P2-201ENST00000417358 873 ntBASIC18.82■□□□□ 0.6
RAD23BP54727 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.82■□□□□ 0.6
RAD23BP54727 AC005104.2-201ENST00000427818 678 ntBASIC18.82■□□□□ 0.6
RAD23BP54727 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.82■□□□□ 0.6
RAD23BP54727 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
RAD23BP54727 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.82■□□□□ 0.6
RAD23BP54727 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.82■□□□□ 0.6
RAD23BP54727 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
RAD23BP54727 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.82■□□□□ 0.6
RAD23BP54727 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAD23BP54727 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAD23BP54727 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
RAD23BP54727 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAD23BP54727 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 SIRPAP1-201ENST00000448467 1770 ntBASIC18.81■□□□□ 0.6
RAD23BP54727 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAD23BP54727 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RAD23BP54727 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAD23BP54727 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.81■□□□□ 0.6
RAD23BP54727 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.81■□□□□ 0.6
RAD23BP54727 MIR5100-201ENST00000579544 119 ntBASIC18.81■□□□□ 0.6
RAD23BP54727 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.81■□□□□ 0.6
RAD23BP54727 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.81■□□□□ 0.6
RAD23BP54727 AC019129.2-201ENST00000609837 1235 ntBASIC18.81■□□□□ 0.6
RAD23BP54727 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.81■□□□□ 0.6
RAD23BP54727 LINC01451-201ENST00000623792 534 ntBASIC18.81■□□□□ 0.6
RAD23BP54727 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAD23BP54727 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.81■□□□□ 0.6
RAD23BP54727 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
RAD23BP54727 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAD23BP54727 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAD23BP54727 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.8■□□□□ 0.6
RAD23BP54727 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAD23BP54727 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD23BP54727 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD23BP54727 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.8■□□□□ 0.6
RAD23BP54727 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.8■□□□□ 0.6
RAD23BP54727 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.8■□□□□ 0.6
RAD23BP54727 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.8■□□□□ 0.6
RAD23BP54727 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAD23BP54727 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.8■□□□□ 0.6
RAD23BP54727 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAD23BP54727 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.8■□□□□ 0.6
RAD23BP54727 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAD23BP54727 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAD23BP54727 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAD23BP54727 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms