Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 PVRIG2P-201ENST00000435460 978 ntBASIC16.53■□□□□ 0.24
SMSP52788 KRT18P23-201ENST00000435622 1283 ntBASIC16.53■□□□□ 0.24
SMSP52788 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.53■□□□□ 0.24
SMSP52788 KRT18P31-201ENST00000506277 1292 ntBASIC16.53■□□□□ 0.24
SMSP52788 FOSL1P1-201ENST00000511041 816 ntBASIC16.53■□□□□ 0.24
SMSP52788 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 AL662844.1-201ENST00000546340 181 ntBASIC16.53■□□□□ 0.24
SMSP52788 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.53■□□□□ 0.24
SMSP52788 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.53■□□□□ 0.24
SMSP52788 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SMSP52788 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.53■□□□□ 0.24
SMSP52788 IGHV3-41-201ENST00000613121 348 ntBASIC16.53■□□□□ 0.24
SMSP52788 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.53■□□□□ 0.24
SMSP52788 AL031008.1-201ENST00000619963 541 ntBASIC16.53■□□□□ 0.24
SMSP52788 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMSP52788 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 AC008894.3-201ENST00000624324 3103 ntBASIC16.53■□□□□ 0.24
SMSP52788 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SMSP52788 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.53■□□□□ 0.24
SMSP52788 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMSP52788 AC108860.2-201ENST00000562760 2183 ntBASIC16.53■□□□□ 0.24
SMSP52788 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
SMSP52788 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.52■□□□□ 0.24
SMSP52788 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMSP52788 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SMSP52788 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.52■□□□□ 0.24
SMSP52788 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SMSP52788 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SMSP52788 AL022342.1-201ENST00000400363 863 ntBASIC16.52■□□□□ 0.24
SMSP52788 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.52■□□□□ 0.24
SMSP52788 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.52■□□□□ 0.24
SMSP52788 AC009078.2-202ENST00000463353 338 ntBASIC16.52■□□□□ 0.24
SMSP52788 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SMSP52788 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMSP52788 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.52■□□□□ 0.24
SMSP52788 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.52■□□□□ 0.24
SMSP52788 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 AC009053.2-201ENST00000563701 2365 ntBASIC16.52■□□□□ 0.23
SMSP52788 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.52■□□□□ 0.23
SMSP52788 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SMSP52788 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMSP52788 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMSP52788 AC099343.3-201ENST00000605834 2503 ntBASIC16.51■□□□□ 0.23
SMSP52788 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMSP52788 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMSP52788 AP000347.1-202ENST00000435868 847 ntBASIC16.51■□□□□ 0.23
SMSP52788 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.51■□□□□ 0.23
SMSP52788 AP003733.1-201ENST00000491725 852 ntBASIC16.51■□□□□ 0.23
SMSP52788 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMSP52788 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms