Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AL596257.1-201ENST00000641463 2694 ntBASIC17.1■□□□□ 0.33
CLCN2P51788 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 PHGDH-209ENST00000641074 1780 ntBASIC17.1■□□□□ 0.33
CLCN2P51788 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 SPDYE13P-201ENST00000445314 798 ntBASIC17.09■□□□□ 0.33
CLCN2P51788 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN2P51788 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN2P51788 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN2P51788 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CLCN2P51788 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 AC009102.3-201ENST00000623118 1491 ntBASIC17.09■□□□□ 0.33
CLCN2P51788 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN2P51788 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLCN2P51788 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 DOC2GP-204ENST00000639052 2548 ntBASIC17.09■□□□□ 0.33
CLCN2P51788 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN2P51788 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
CLCN2P51788 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CLCN2P51788 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.08■□□□□ 0.33
CLCN2P51788 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN2P51788 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN2P51788 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN2P51788 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CLCN2P51788 SDHAP2-201ENST00000455183 2001 ntBASIC17.08■□□□□ 0.33
CLCN2P51788 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CLCN2P51788 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN2P51788 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 MIR149-201ENST00000384879 89 ntBASIC17.08■□□□□ 0.32
CLCN2P51788 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCN2P51788 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 UPK3BP1-201ENST00000428678 509 ntBASIC17.08■□□□□ 0.32
CLCN2P51788 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCN2P51788 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.08■□□□□ 0.32
CLCN2P51788 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.08■□□□□ 0.32
CLCN2P51788 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN2P51788 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.08■□□□□ 0.32
CLCN2P51788 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CLCN2P51788 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLCN2P51788 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN2P51788 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLCN2P51788 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN2P51788 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLCN2P51788 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN2P51788 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN2P51788 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms