Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC30.75■■■□□ 2.51
NCAPD3P42695 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NCAPD3P42695 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC30.74■■■□□ 2.51
NCAPD3P42695 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC30.74■■■□□ 2.51
NCAPD3P42695 AC005332.7-201ENST00000614046 2005 ntBASIC30.74■■■□□ 2.51
NCAPD3P42695 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC30.74■■■□□ 2.51
NCAPD3P42695 IGHV3-71-201ENST00000523324 359 ntBASIC30.74■■■□□ 2.51
NCAPD3P42695 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC30.74■■■□□ 2.51
NCAPD3P42695 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
NCAPD3P42695 AC116407.2-201ENST00000613639 860 ntBASIC30.74■■■□□ 2.51
NCAPD3P42695 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NCAPD3P42695 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC30.74■■■□□ 2.51
NCAPD3P42695 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC30.74■■■□□ 2.51
NCAPD3P42695 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
NCAPD3P42695 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC30.73■■■□□ 2.51
NCAPD3P42695 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
NCAPD3P42695 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC30.73■■■□□ 2.51
NCAPD3P42695 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC30.73■■■□□ 2.51
NCAPD3P42695 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC30.73■■■□□ 2.51
NCAPD3P42695 AL590560.3-201ENST00000623350 461 ntBASIC30.73■■■□□ 2.51
NCAPD3P42695 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC30.73■■■□□ 2.51
NCAPD3P42695 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NCAPD3P42695 PTGES2-AS1-201ENST00000443493 2100 ntBASIC30.72■■■□□ 2.51
NCAPD3P42695 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NCAPD3P42695 UXT-AS1-201ENST00000590504 1525 ntBASIC30.72■■■□□ 2.51
NCAPD3P42695 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC30.72■■■□□ 2.51
NCAPD3P42695 MIR346-201ENST00000362234 95 ntBASIC30.72■■■□□ 2.51
NCAPD3P42695 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC30.72■■■□□ 2.51
NCAPD3P42695 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC30.72■■■□□ 2.51
NCAPD3P42695 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC30.72■■■□□ 2.51
NCAPD3P42695 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC30.72■■■□□ 2.51
NCAPD3P42695 AP000842.3-202ENST00000569238 1080 ntBASIC30.72■■■□□ 2.51
NCAPD3P42695 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NCAPD3P42695 AC022144.1-201ENST00000602255 1580 ntBASIC30.72■■■□□ 2.51
NCAPD3P42695 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NCAPD3P42695 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC30.72■■■□□ 2.51
NCAPD3P42695 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
NCAPD3P42695 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC30.71■■■□□ 2.51
NCAPD3P42695 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC30.71■■■□□ 2.51
NCAPD3P42695 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NCAPD3P42695 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
NCAPD3P42695 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC30.71■■■□□ 2.51
NCAPD3P42695 IGHV3-62-201ENST00000520057 340 ntBASIC30.71■■■□□ 2.51
NCAPD3P42695 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NCAPD3P42695 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC30.71■■■□□ 2.51
NCAPD3P42695 AL135999.2-201ENST00000622438 1686 ntBASIC30.71■■■□□ 2.51
NCAPD3P42695 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
NCAPD3P42695 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC30.7■■■□□ 2.51
NCAPD3P42695 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
NCAPD3P42695 AC073592.8-201ENST00000624126 511 ntBASIC30.7■■■□□ 2.51
NCAPD3P42695 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
NCAPD3P42695 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NCAPD3P42695 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
NCAPD3P42695 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC30.7■■■□□ 2.5
NCAPD3P42695 GPR53P-205ENST00000457298 1084 ntBASIC30.7■■■□□ 2.5
NCAPD3P42695 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
NCAPD3P42695 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC30.7■■■□□ 2.5
NCAPD3P42695 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC30.7■■■□□ 2.5
NCAPD3P42695 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC30.7■■■□□ 2.5
NCAPD3P42695 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NCAPD3P42695 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NCAPD3P42695 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NCAPD3P42695 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NCAPD3P42695 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
NCAPD3P42695 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NCAPD3P42695 AC126763.1-201ENST00000552015 2118 ntBASIC30.69■■■□□ 2.5
NCAPD3P42695 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC30.69■■■□□ 2.5
NCAPD3P42695 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC30.69■■■□□ 2.5
NCAPD3P42695 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
NCAPD3P42695 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC30.68■■■□□ 2.5
NCAPD3P42695 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC30.68■■■□□ 2.5
NCAPD3P42695 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC30.68■■■□□ 2.5
NCAPD3P42695 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC30.68■■■□□ 2.5
NCAPD3P42695 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
NCAPD3P42695 AC079776.1-201ENST00000401540 1152 ntBASIC30.68■■■□□ 2.5
NCAPD3P42695 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
NCAPD3P42695 IFT20-216ENST00000588477 774 ntTSL 5 BASIC30.68■■■□□ 2.5
NCAPD3P42695 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms