Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP6V1AP38606 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP6V1AP38606 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.3■■□□□ 1.16
ATP6V1AP38606 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
ATP6V1AP38606 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.3■■□□□ 1.16
ATP6V1AP38606 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP6V1AP38606 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP6V1AP38606 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 MYCLP1-201ENST00000372451 1075 ntBASIC22.29■■□□□ 1.16
ATP6V1AP38606 ACTG1P4-201ENST00000425123 1122 ntBASIC22.29■■□□□ 1.16
ATP6V1AP38606 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.29■■□□□ 1.16
ATP6V1AP38606 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.29■■□□□ 1.16
ATP6V1AP38606 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ATP6V1AP38606 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP6V1AP38606 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP6V1AP38606 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP6V1AP38606 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 AC092474.2-201ENST00000424288 719 ntBASIC22.28■■□□□ 1.16
ATP6V1AP38606 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 AL513480.1-201ENST00000451731 511 ntBASIC22.28■■□□□ 1.16
ATP6V1AP38606 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.28■■□□□ 1.16
ATP6V1AP38606 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ATP6V1AP38606 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP6V1AP38606 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP6V1AP38606 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 AC112191.1-201ENST00000523689 701 ntBASIC22.27■■□□□ 1.16
ATP6V1AP38606 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 ACTL9-202ENST00000612068 1252 ntBASIC22.27■■□□□ 1.16
ATP6V1AP38606 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.27■■□□□ 1.16
ATP6V1AP38606 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP6V1AP38606 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.27■■□□□ 1.15
ATP6V1AP38606 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.27■■□□□ 1.15
ATP6V1AP38606 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
ATP6V1AP38606 AC135776.1-201ENST00000319817 2481 ntBASIC22.26■■□□□ 1.15
ATP6V1AP38606 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 IGHV3OR16-6-201ENST00000568775 360 ntBASIC22.26■■□□□ 1.15
ATP6V1AP38606 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.26■■□□□ 1.15
ATP6V1AP38606 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP6V1AP38606 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V1AP38606 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V1AP38606 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V1AP38606 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V1AP38606 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP6V1AP38606 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.25■■□□□ 1.15
ATP6V1AP38606 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms