Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPB2P35606 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COPB2P35606 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.07■□□□□ 0.8
COPB2P35606 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.07■□□□□ 0.8
COPB2P35606 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
COPB2P35606 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.07■□□□□ 0.8
COPB2P35606 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.07■□□□□ 0.8
COPB2P35606 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.07■□□□□ 0.8
COPB2P35606 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.07■□□□□ 0.8
COPB2P35606 AC009336.1-201ENST00000608941 1553 ntBASIC20.07■□□□□ 0.8
COPB2P35606 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.07■□□□□ 0.8
COPB2P35606 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPB2P35606 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.06■□□□□ 0.8
COPB2P35606 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
COPB2P35606 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.06■□□□□ 0.8
COPB2P35606 AC134684.3-201ENST00000641758 218 ntBASIC20.06■□□□□ 0.8
COPB2P35606 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 WIZP1-201ENST00000531444 2299 ntBASIC20.06■□□□□ 0.8
COPB2P35606 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPB2P35606 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
COPB2P35606 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.05■□□□□ 0.8
COPB2P35606 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COPB2P35606 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COPB2P35606 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.05■□□□□ 0.8
COPB2P35606 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 HCG4B-203ENST00000450128 991 ntBASIC20.05■□□□□ 0.8
COPB2P35606 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.05■□□□□ 0.8
COPB2P35606 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 AC010654.1-201ENST00000615722 808 ntBASIC20.05■□□□□ 0.8
COPB2P35606 GGTLC5P-201ENST00000617623 998 ntBASIC20.05■□□□□ 0.8
COPB2P35606 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 AC005332.8-201ENST00000622750 2735 ntBASIC20.05■□□□□ 0.8
COPB2P35606 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.05■□□□□ 0.8
COPB2P35606 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPB2P35606 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
COPB2P35606 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
COPB2P35606 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.04■□□□□ 0.8
COPB2P35606 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPB2P35606 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms