Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 AC246785.2-201ENST00000432512 513 ntBASIC16.91■□□□□ 0.3
PTX3P26022 VENTXP7-201ENST00000475503 772 ntBASIC16.91■□□□□ 0.3
PTX3P26022 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.91■□□□□ 0.3
PTX3P26022 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PTX3P26022 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
PTX3P26022 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.91■□□□□ 0.3
PTX3P26022 AC139713.2-201ENST00000641328 2723 ntBASIC16.9■□□□□ 0.3
PTX3P26022 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 AL645608.8-201ENST00000606034 2086 ntBASIC16.9■□□□□ 0.3
PTX3P26022 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTX3P26022 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.9■□□□□ 0.3
PTX3P26022 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.9■□□□□ 0.3
PTX3P26022 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.9■□□□□ 0.3
PTX3P26022 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTX3P26022 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTX3P26022 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTX3P26022 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.3
PTX3P26022 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PTX3P26022 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.89■□□□□ 0.3
PTX3P26022 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTX3P26022 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PTX3P26022 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PTX3P26022 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 AL845331.1-201ENST00000424978 1190 ntBASIC16.89■□□□□ 0.29
PTX3P26022 TSSC2-201ENST00000450217 709 ntBASIC16.89■□□□□ 0.29
PTX3P26022 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.89■□□□□ 0.29
PTX3P26022 AL138831.2-201ENST00000606564 490 ntBASIC16.89■□□□□ 0.29
PTX3P26022 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 AP000550.4-202ENST00000639755 178 ntBASIC16.89■□□□□ 0.29
PTX3P26022 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
PTX3P26022 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTX3P26022 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PTX3P26022 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.88■□□□□ 0.29
PTX3P26022 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PTX3P26022 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.88■□□□□ 0.29
PTX3P26022 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTX3P26022 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 AC007967.3-201ENST00000434308 558 ntBASIC16.88■□□□□ 0.29
PTX3P26022 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.88■□□□□ 0.29
PTX3P26022 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.88■□□□□ 0.29
PTX3P26022 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms