Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MMP8P22894 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MMP8P22894 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP8P22894 MINOS1P3-201ENST00000457048 203 ntBASIC18.51■□□□□ 0.55
MMP8P22894 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MMP8P22894 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP8P22894 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 AC092119.3-201ENST00000612618 583 ntBASIC18.51■□□□□ 0.55
MMP8P22894 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.51■□□□□ 0.55
MMP8P22894 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MMP8P22894 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP8P22894 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MMP8P22894 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 AC092329.2-201ENST00000598402 547 ntBASIC18.5■□□□□ 0.55
MMP8P22894 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 INTS4P1-201ENST00000438455 1935 ntBASIC18.5■□□□□ 0.55
MMP8P22894 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP8P22894 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP8P22894 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP8P22894 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MMP8P22894 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MMP8P22894 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
MMP8P22894 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP8P22894 AP000867.3-201ENST00000524675 377 ntBASIC18.49■□□□□ 0.55
MMP8P22894 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP8P22894 AC074051.2-201ENST00000565115 352 ntBASIC18.49■□□□□ 0.55
MMP8P22894 AC012615.1-201ENST00000565797 1299 ntBASIC18.49■□□□□ 0.55
MMP8P22894 AC111152.3-201ENST00000569699 673 ntBASIC18.49■□□□□ 0.55
MMP8P22894 STK25P1-201ENST00000585406 838 ntBASIC18.49■□□□□ 0.55
MMP8P22894 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.49■□□□□ 0.55
MMP8P22894 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.49■□□□□ 0.55
MMP8P22894 AD001527.2-201ENST00000622994 785 ntBASIC18.49■□□□□ 0.55
MMP8P22894 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 AC116353.5-201ENST00000638148 1699 ntBASIC18.49■□□□□ 0.55
MMP8P22894 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MMP8P22894 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MMP8P22894 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 BCL2-203ENST00000589955 5011 ntBASIC18.49■□□□□ 0.55
MMP8P22894 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.49■□□□□ 0.55
MMP8P22894 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MMP8P22894 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms