Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH3P22223 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 AC004870.1-201ENST00000315132 882 ntBASIC17.28■□□□□ 0.36
CDH3P22223 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH3P22223 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH3P22223 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH3P22223 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH3P22223 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 AC112698.1-201ENST00000510299 916 ntBASIC17.28■□□□□ 0.36
CDH3P22223 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH3P22223 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 RN7SL510P-201ENST00000581311 263 ntBASIC17.28■□□□□ 0.36
CDH3P22223 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH3P22223 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.28■□□□□ 0.36
CDH3P22223 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH3P22223 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH3P22223 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 POM121L3P-201ENST00000419331 1163 ntBASIC17.27■□□□□ 0.36
CDH3P22223 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 UNC93B7-201ENST00000509439 705 ntBASIC17.27■□□□□ 0.36
CDH3P22223 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH3P22223 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH3P22223 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH3P22223 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH3P22223 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH3P22223 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH3P22223 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH3P22223 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDH3P22223 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH3P22223 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH3P22223 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CDH3P22223 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH3P22223 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH3P22223 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH3P22223 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH3P22223 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CDH3P22223 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH3P22223 KRT16P4-201ENST00000453883 522 ntBASIC17.26■□□□□ 0.35
CDH3P22223 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH3P22223 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH3P22223 AC005336.2-201ENST00000593183 939 ntBASIC17.26■□□□□ 0.35
CDH3P22223 BNIP3P18-201ENST00000593976 575 ntBASIC17.26■□□□□ 0.35
CDH3P22223 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms