Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM21P19474 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM21P19474 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRIM21P19474 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM21P19474 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM21P19474 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM21P19474 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM21P19474 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM21P19474 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM21P19474 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM21P19474 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM21P19474 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM21P19474 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM21P19474 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM21P19474 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM21P19474 HYMAI.1-201ENST00000620949 238 ntBASIC19.45■□□□□ 0.7
TRIM21P19474 AC079602.3-201ENST00000623931 403 ntBASIC19.45■□□□□ 0.7
TRIM21P19474 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
TRIM21P19474 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
TRIM21P19474 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 AC009949.1-201ENST00000623048 1830 ntBASIC19.44■□□□□ 0.7
TRIM21P19474 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 MIR662-201ENST00000384847 95 ntBASIC19.44■□□□□ 0.7
TRIM21P19474 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM21P19474 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM21P19474 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM21P19474 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM21P19474 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM21P19474 HLA-J-201ENST00000462773 1622 ntBASIC19.43■□□□□ 0.7
TRIM21P19474 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM21P19474 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM21P19474 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.43■□□□□ 0.7
TRIM21P19474 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM21P19474 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.43■□□□□ 0.7
TRIM21P19474 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM21P19474 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM21P19474 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM21P19474 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM21P19474 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM21P19474 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM21P19474 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM21P19474 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM21P19474 AC099398.1-201ENST00000567919 2776 ntBASIC19.43■□□□□ 0.7
TRIM21P19474 AD000864.1-201ENST00000624076 2295 ntBASIC19.42■□□□□ 0.7
TRIM21P19474 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM21P19474 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM21P19474 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM21P19474 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM21P19474 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM21P19474 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms