Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CAPN2P17655 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN2P17655 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN2P17655 MIR770-201ENST00000390219 98 ntBASIC20.27■□□□□ 0.84
CAPN2P17655 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.27■□□□□ 0.84
CAPN2P17655 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CAPN2P17655 AP002472.1-201ENST00000577490 586 ntBASIC20.27■□□□□ 0.84
CAPN2P17655 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 AC006557.2-201ENST00000592985 1240 ntBASIC20.27■□□□□ 0.84
CAPN2P17655 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.27■□□□□ 0.84
CAPN2P17655 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN2P17655 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN2P17655 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CAPN2P17655 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CAPN2P17655 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.83
CAPN2P17655 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 KRT8P50-201ENST00000562022 1438 ntBASIC20.27■□□□□ 0.83
CAPN2P17655 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN2P17655 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.27■□□□□ 0.83
CAPN2P17655 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CAPN2P17655 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.26■□□□□ 0.83
CAPN2P17655 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CAPN2P17655 MTCL1P1-201ENST00000446207 792 ntBASIC20.26■□□□□ 0.83
CAPN2P17655 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.26■□□□□ 0.83
CAPN2P17655 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.26■□□□□ 0.83
CAPN2P17655 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.26■□□□□ 0.83
CAPN2P17655 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 NKAPP1-205ENST00000585790 367 ntBASIC20.26■□□□□ 0.83
CAPN2P17655 AL596442.2-201ENST00000610240 980 ntBASIC20.26■□□□□ 0.83
CAPN2P17655 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CAPN2P17655 AC005593.1-201ENST00000624894 515 ntBASIC20.26■□□□□ 0.83
CAPN2P17655 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.26■□□□□ 0.83
CAPN2P17655 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN2P17655 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN2P17655 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPN2P17655 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPN2P17655 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN2P17655 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN2P17655 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.25■□□□□ 0.83
CAPN2P17655 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.25■□□□□ 0.83
CAPN2P17655 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CAPN2P17655 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.25■□□□□ 0.83
CAPN2P17655 AC064836.3-201ENST00000607928 673 ntBASIC20.25■□□□□ 0.83
CAPN2P17655 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN2P17655 C20orf181-201ENST00000623918 480 ntBASIC20.25■□□□□ 0.83
CAPN2P17655 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN2P17655 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPN2P17655 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CAPN2P17655 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CAPN2P17655 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN2P17655 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CAPN2P17655 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
CAPN2P17655 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms