Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LAMP1P11279 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.7■□□□□ 0.26
LAMP1P11279 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
LAMP1P11279 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LAMP1P11279 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.69■□□□□ 0.26
LAMP1P11279 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 AC010460.3-201ENST00000511359 1579 ntBASIC16.69■□□□□ 0.26
LAMP1P11279 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
LAMP1P11279 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LAMP1P11279 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.69■□□□□ 0.26
LAMP1P11279 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.69■□□□□ 0.26
LAMP1P11279 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.69■□□□□ 0.26
LAMP1P11279 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LAMP1P11279 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.69■□□□□ 0.26
LAMP1P11279 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.69■□□□□ 0.26
LAMP1P11279 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LAMP1P11279 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LAMP1P11279 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.68■□□□□ 0.26
LAMP1P11279 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
LAMP1P11279 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.68■□□□□ 0.26
LAMP1P11279 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.68■□□□□ 0.26
LAMP1P11279 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LAMP1P11279 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.68■□□□□ 0.26
LAMP1P11279 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.68■□□□□ 0.26
LAMP1P11279 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.68■□□□□ 0.26
LAMP1P11279 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 AC016396.2-201ENST00000562575 1417 ntBASIC16.68■□□□□ 0.26
LAMP1P11279 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 AC097374.2-201ENST00000618617 1306 ntBASIC16.68■□□□□ 0.26
LAMP1P11279 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LAMP1P11279 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LAMP1P11279 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LAMP1P11279 PKD1P1-201ENST00000458669 6805 ntBASIC16.67■□□□□ 0.26
LAMP1P11279 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms