Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 MED15P5-201ENST00000423150 992 ntBASIC13.77□□□□□ -0.21
CD28P10747 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 PMPCAP1-201ENST00000508114 1576 ntBASIC13.77□□□□□ -0.21
CD28P10747 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.77□□□□□ -0.21
CD28P10747 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.77□□□□□ -0.21
CD28P10747 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 AC140113.2-201ENST00000604370 208 ntBASIC13.77□□□□□ -0.21
CD28P10747 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 Z83851.2-201ENST00000609564 659 ntBASIC13.77□□□□□ -0.21
CD28P10747 AC027601.4-201ENST00000611259 610 ntBASIC13.77□□□□□ -0.21
CD28P10747 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.77□□□□□ -0.21
CD28P10747 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 AL022326.1-202ENST00000641533 845 ntBASIC13.77□□□□□ -0.21
CD28P10747 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.77□□□□□ -0.21
CD28P10747 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD28P10747 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 SIRPAP1-201ENST00000448467 1770 ntBASIC13.76□□□□□ -0.21
CD28P10747 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 MIR1233-2-201ENST00000408138 82 ntBASIC13.76□□□□□ -0.21
CD28P10747 MIR1233-1-201ENST00000408722 82 ntBASIC13.76□□□□□ -0.21
CD28P10747 LAGE3P1-201ENST00000425356 484 ntBASIC13.76□□□□□ -0.21
CD28P10747 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 DUTP2-201ENST00000519164 463 ntBASIC13.76□□□□□ -0.21
CD28P10747 AC034105.1-201ENST00000563488 319 ntBASIC13.76□□□□□ -0.21
CD28P10747 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 AL356488.2-201ENST00000602755 427 ntBASIC13.76□□□□□ -0.21
CD28P10747 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 AD001527.2-201ENST00000622994 785 ntBASIC13.76□□□□□ -0.21
CD28P10747 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CD28P10747 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD28P10747 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 AL096828.2-201ENST00000567259 1965 ntBASIC13.76□□□□□ -0.21
CD28P10747 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CD28P10747 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD28P10747 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD28P10747 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.75□□□□□ -0.21
CD28P10747 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD28P10747 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CD28P10747 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms