Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCNYL3P0C7X3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 KRT18P67-201ENST00000432816 1264 ntBASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 KRT18P65-201ENST00000439811 1286 ntBASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 AC005336.2-201ENST00000593183 939 ntBASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCNYL3P0C7X3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CCNYL3P0C7X3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 RPS2P28-201ENST00000314255 741 ntBASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 RBM17P3-201ENST00000417687 1192 ntBASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 AC073648.2-201ENST00000510116 352 ntBASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 AC093677.2-201ENST00000600169 1863 ntBASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCNYL3P0C7X3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms