Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MYCLP1-201ENST00000372451 1075 ntBASIC16.22■□□□□ 0.19
THBS1P07996 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.22■□□□□ 0.19
THBS1P07996 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 AC011498.5-201ENST00000592027 486 ntBASIC16.22■□□□□ 0.19
THBS1P07996 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
THBS1P07996 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
THBS1P07996 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.21■□□□□ 0.19
THBS1P07996 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.21■□□□□ 0.19
THBS1P07996 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
THBS1P07996 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.21■□□□□ 0.19
THBS1P07996 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
THBS1P07996 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
THBS1P07996 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
THBS1P07996 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.21■□□□□ 0.19
THBS1P07996 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
THBS1P07996 AC007967.3-201ENST00000434308 558 ntBASIC16.21■□□□□ 0.19
THBS1P07996 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 KRT8P26-201ENST00000534154 1276 ntBASIC16.21■□□□□ 0.19
THBS1P07996 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.21■□□□□ 0.19
THBS1P07996 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
THBS1P07996 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.21■□□□□ 0.19
THBS1P07996 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
THBS1P07996 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
THBS1P07996 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
THBS1P07996 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
THBS1P07996 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THBS1P07996 AC125634.1-201ENST00000438758 1403 ntBASIC16.2■□□□□ 0.18
THBS1P07996 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.2■□□□□ 0.18
THBS1P07996 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
THBS1P07996 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.2■□□□□ 0.18
THBS1P07996 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.2■□□□□ 0.18
THBS1P07996 AC124864.1-201ENST00000623408 392 ntBASIC16.2■□□□□ 0.18
THBS1P07996 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
THBS1P07996 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.2■□□□□ 0.18
THBS1P07996 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
THBS1P07996 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS1P07996 AL121761.2-201ENST00000598007 1648 ntBASIC16.19■□□□□ 0.18
THBS1P07996 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS1P07996 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.19■□□□□ 0.18
THBS1P07996 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
THBS1P07996 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms