Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
HMGN1P05114 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGN1P05114 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGN1P05114 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGN1P05114 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGN1P05114 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGN1P05114 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HMGN1P05114 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGN1P05114 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGN1P05114 FER1L4-210ENST00000615531 5998 ntBASIC15.98■□□□□ 0.15
HMGN1P05114 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGN1P05114 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGN1P05114 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGN1P05114 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 INGX-201ENST00000359239 846 ntBASIC15.97■□□□□ 0.15
HMGN1P05114 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGN1P05114 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGN1P05114 AC008550.1-201ENST00000511500 884 ntBASIC15.97■□□□□ 0.15
HMGN1P05114 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
HMGN1P05114 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HMGN1P05114 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
HMGN1P05114 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGN1P05114 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGN1P05114 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HMGN1P05114 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 AL118508.1-201ENST00000613502 2345 ntBASIC15.96■□□□□ 0.15
HMGN1P05114 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HMGN1P05114 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HMGN1P05114 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HMGN1P05114 AC005104.2-201ENST00000427818 678 ntBASIC15.96■□□□□ 0.15
HMGN1P05114 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.96■□□□□ 0.15
HMGN1P05114 AC034232.1-201ENST00000506026 1064 ntBASIC15.96■□□□□ 0.15
HMGN1P05114 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.96■□□□□ 0.15
HMGN1P05114 NAPSB-206ENST00000562112 1266 ntBASIC15.96■□□□□ 0.15
HMGN1P05114 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
HMGN1P05114 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
HMGN1P05114 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGN1P05114 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGN1P05114 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGN1P05114 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGN1P05114 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGN1P05114 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.96■□□□□ 0.14
HMGN1P05114 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGN1P05114 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGN1P05114 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGN1P05114 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms