Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFBP01127 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PDGFBP01127 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFBP01127 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.58■□□□□ 0.4
PDGFBP01127 AC026150.2-201ENST00000564693 1156 ntBASIC17.58■□□□□ 0.4
PDGFBP01127 AL135744.1-201ENST00000565098 629 ntBASIC17.58■□□□□ 0.4
PDGFBP01127 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PDGFBP01127 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFBP01127 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDGFBP01127 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.58■□□□□ 0.4
PDGFBP01127 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 AL590787.1-201ENST00000568856 1315 ntBASIC17.57■□□□□ 0.4
PDGFBP01127 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFBP01127 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFBP01127 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.57■□□□□ 0.4
PDGFBP01127 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.57■□□□□ 0.4
PDGFBP01127 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PDGFBP01127 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.57■□□□□ 0.4
PDGFBP01127 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PDGFBP01127 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFBP01127 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.57■□□□□ 0.4
PDGFBP01127 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDGFBP01127 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.56■□□□□ 0.4
PDGFBP01127 SPCS2P4-201ENST00000436160 681 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 AC140658.5-201ENST00000438532 169 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 SPDYE14P-201ENST00000442619 822 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 RN7SL589P-201ENST00000481268 310 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.56■□□□□ 0.4
PDGFBP01127 AL158211.3-201ENST00000607385 239 ntBASIC17.56■□□□□ 0.4
PDGFBP01127 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDGFBP01127 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 AC093010.1-201ENST00000473625 1624 ntBASIC17.55■□□□□ 0.4
PDGFBP01127 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 AC092580.3-201ENST00000430932 139 ntBASIC17.55■□□□□ 0.4
PDGFBP01127 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.55■□□□□ 0.4
PDGFBP01127 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.55■□□□□ 0.4
PDGFBP01127 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.55■□□□□ 0.4
PDGFBP01127 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.55■□□□□ 0.4
PDGFBP01127 MIR6799-201ENST00000620297 69 ntBASIC17.55■□□□□ 0.4
PDGFBP01127 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
PDGFBP01127 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDGFBP01127 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDGFBP01127 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms