Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP1O94782 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USP1O94782 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.86■□□□□ 0.45
USP1O94782 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
USP1O94782 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.85■□□□□ 0.45
USP1O94782 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.85■□□□□ 0.45
USP1O94782 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 AC022211.2-201ENST00000585075 2527 ntBASIC17.85■□□□□ 0.45
USP1O94782 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.85■□□□□ 0.45
USP1O94782 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.85■□□□□ 0.45
USP1O94782 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USP1O94782 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
USP1O94782 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
USP1O94782 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
USP1O94782 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
USP1O94782 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 ARMC10P1-201ENST00000313754 855 ntBASIC17.84■□□□□ 0.45
USP1O94782 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 AC005104.2-201ENST00000427818 678 ntBASIC17.84■□□□□ 0.45
USP1O94782 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 MTCL1P1-201ENST00000446207 792 ntBASIC17.84■□□□□ 0.45
USP1O94782 AC112907.2-201ENST00000448639 330 ntBASIC17.84■□□□□ 0.45
USP1O94782 AL359075.1-203ENST00000462729 1002 ntBASIC17.84■□□□□ 0.45
USP1O94782 AC068472.1-201ENST00000474589 881 ntBASIC17.84■□□□□ 0.45
USP1O94782 KRT18P35-201ENST00000510488 1269 ntBASIC17.84■□□□□ 0.45
USP1O94782 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.84■□□□□ 0.45
USP1O94782 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 HYMAI.1-201ENST00000620949 238 ntBASIC17.84■□□□□ 0.45
USP1O94782 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.84■□□□□ 0.45
USP1O94782 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 AC018695.7-201ENST00000624587 2492 ntBASIC17.84■□□□□ 0.45
USP1O94782 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
USP1O94782 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 AP001094.4-201ENST00000579008 2176 ntBASIC17.84■□□□□ 0.45
USP1O94782 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
USP1O94782 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
USP1O94782 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.84■□□□□ 0.45
USP1O94782 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
USP1O94782 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.83■□□□□ 0.45
USP1O94782 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
USP1O94782 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms