Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT33AO76009 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT33AO76009 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 IGHGP-201ENST00000390555 1178 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.02■□□□□ 0.16
KRT33AO76009 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 TSPY12P-201ENST00000421279 868 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 TSPY22P-201ENST00000427496 604 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT33AO76009 BX276092.5-203ENST00000456199 560 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT33AO76009 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
KRT33AO76009 AC113404.2-201ENST00000507884 177 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT33AO76009 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT33AO76009 AL358472.4-201ENST00000633140 710 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 AP000550.4-202ENST00000639755 178 ntBASIC16.02■□□□□ 0.16
KRT33AO76009 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 AC124067.4-201ENST00000519691 2379 ntBASIC16.02■□□□□ 0.15
KRT33AO76009 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
KRT33AO76009 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT33AO76009 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.02■□□□□ 0.15
KRT33AO76009 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT33AO76009 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT33AO76009 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 AL353692.3-201ENST00000407031 1396 ntBASIC16.01■□□□□ 0.15
KRT33AO76009 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
KRT33AO76009 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT33AO76009 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT33AO76009 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
KRT33AO76009 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 AC004263.2-201ENST00000617183 678 ntBASIC16.01■□□□□ 0.15
KRT33AO76009 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT33AO76009 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
KRT33AO76009 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT33AO76009 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
KRT33AO76009 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16■□□□□ 0.15
KRT33AO76009 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 FXN-203ENST00000396366 922 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 DDT-203ENST00000403754 569 ntTSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 DDT-206ENST00000430101 573 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
KRT33AO76009 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 SPDYE13P-201ENST00000445314 798 ntBASIC16■□□□□ 0.15
KRT33AO76009 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16■□□□□ 0.15
KRT33AO76009 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16■□□□□ 0.15
KRT33AO76009 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT33AO76009 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
KRT33AO76009 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms