Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 ME2-218ENST00000640965 2476 ntTSL 5 BASIC7.77□□□□□ -1.17
USH2AO75445 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
USH2AO75445 FXNP2-201ENST00000411625 547 ntBASIC7.77□□□□□ -1.17
USH2AO75445 AL353779.1-201ENST00000434793 351 ntBASIC7.77□□□□□ -1.17
USH2AO75445 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC7.77□□□□□ -1.17
USH2AO75445 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 RN7SL589P-201ENST00000481268 310 ntBASIC7.77□□□□□ -1.17
USH2AO75445 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 AC069120.2-201ENST00000524091 540 ntBASIC7.77□□□□□ -1.17
USH2AO75445 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC7.77□□□□□ -1.17
USH2AO75445 AC009118.2-201ENST00000613275 655 ntBASIC7.77□□□□□ -1.17
USH2AO75445 SPDYE12P-201ENST00000618416 771 ntBASIC7.77□□□□□ -1.17
USH2AO75445 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC7.77□□□□□ -1.17
USH2AO75445 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USH2AO75445 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC7.76□□□□□ -1.17
USH2AO75445 CXCL1P1-201ENST00000502804 216 ntBASIC7.76□□□□□ -1.17
USH2AO75445 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 PPA1-206ENST00000625364 644 ntTSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC7.76□□□□□ -1.17
USH2AO75445 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC7.76□□□□□ -1.17
USH2AO75445 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
USH2AO75445 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC7.76□□□□□ -1.17
USH2AO75445 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 AC026740.1-201ENST00000607068 791 ntBASIC7.76□□□□□ -1.17
USH2AO75445 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 MIR1908-201ENST00000410394 80 ntBASIC7.76□□□□□ -1.17
USH2AO75445 AL355994.2-201ENST00000447882 704 ntBASIC7.76□□□□□ -1.17
USH2AO75445 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 RNA5-8SN1-201ENST00000610460 153 ntBASIC7.76□□□□□ -1.17
USH2AO75445 RNA5-8SN5-202ENST00000612463 153 ntBASIC7.76□□□□□ -1.17
USH2AO75445 RNA5-8SN4-201ENST00000613359 153 ntBASIC7.76□□□□□ -1.17
USH2AO75445 RNA5-8SN5-201ENST00000619471 153 ntBASIC7.76□□□□□ -1.17
USH2AO75445 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC7.76□□□□□ -1.17
USH2AO75445 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC7.76□□□□□ -1.17
USH2AO75445 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 RN7SL752P-201ENST00000463779 287 ntBASIC7.76□□□□□ -1.17
USH2AO75445 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC7.76□□□□□ -1.17
USH2AO75445 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 AC097637.2-201ENST00000624096 1997 ntBASIC7.76□□□□□ -1.17
USH2AO75445 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USH2AO75445 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC7.76□□□□□ -1.17
USH2AO75445 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 RN7SL837P-201ENST00000463010 287 ntBASIC7.75□□□□□ -1.17
USH2AO75445 LY6E-204ENST00000519546 971 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms