Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
MSCO60682 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.7■□□□□ 0.74
MSCO60682 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 AC004449.1-201ENST00000564240 433 ntBASIC19.7■□□□□ 0.74
MSCO60682 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.7■□□□□ 0.74
MSCO60682 AC023141.13-201ENST00000604991 943 ntBASIC19.7■□□□□ 0.74
MSCO60682 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MSCO60682 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.7■□□□□ 0.74
MSCO60682 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MSCO60682 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.7■□□□□ 0.74
MSCO60682 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
MSCO60682 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSCO60682 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MSCO60682 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.69■□□□□ 0.74
MSCO60682 AL020996.1-203ENST00000536896 2307 ntBASIC19.69■□□□□ 0.74
MSCO60682 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
MSCO60682 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.69■□□□□ 0.74
MSCO60682 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MSCO60682 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.69■□□□□ 0.74
MSCO60682 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.69■□□□□ 0.74
MSCO60682 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.69■□□□□ 0.74
MSCO60682 AL513210.1-201ENST00000629608 234 ntBASIC19.69■□□□□ 0.74
MSCO60682 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.69■□□□□ 0.74
MSCO60682 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.69■□□□□ 0.74
MSCO60682 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSCO60682 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MSCO60682 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MSCO60682 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.68■□□□□ 0.74
MSCO60682 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MSCO60682 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 BCRP1-201ENST00000444246 691 ntBASIC19.68■□□□□ 0.74
MSCO60682 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.68■□□□□ 0.74
MSCO60682 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MSCO60682 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MSCO60682 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.68■□□□□ 0.74
MSCO60682 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSCO60682 AC025580.3-201ENST00000617932 1424 ntBASIC19.68■□□□□ 0.74
MSCO60682 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.67■□□□□ 0.74
MSCO60682 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSCO60682 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSCO60682 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MSCO60682 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms