Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KLHL41O60662 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
KLHL41O60662 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.51■□□□□ 0.39
KLHL41O60662 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KLHL41O60662 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.51■□□□□ 0.39
KLHL41O60662 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.51■□□□□ 0.39
KLHL41O60662 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.51■□□□□ 0.39
KLHL41O60662 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.51■□□□□ 0.39
KLHL41O60662 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.51■□□□□ 0.39
KLHL41O60662 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KLHL41O60662 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KLHL41O60662 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KLHL41O60662 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KLHL41O60662 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
KLHL41O60662 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
KLHL41O60662 AL024508.2-201ENST00000607749 1894 ntBASIC17.5■□□□□ 0.39
KLHL41O60662 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 AL139384.1-201ENST00000612143 3047 ntBASIC17.5■□□□□ 0.39
KLHL41O60662 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 KRT18P23-201ENST00000435622 1283 ntBASIC17.5■□□□□ 0.39
KLHL41O60662 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.5■□□□□ 0.39
KLHL41O60662 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.5■□□□□ 0.39
KLHL41O60662 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
KLHL41O60662 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
KLHL41O60662 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 CROCCP1-201ENST00000426910 5675 ntBASIC17.5■□□□□ 0.39
KLHL41O60662 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
KLHL41O60662 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
KLHL41O60662 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.5■□□□□ 0.39
KLHL41O60662 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
KLHL41O60662 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KLHL41O60662 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
KLHL41O60662 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.49■□□□□ 0.39
KLHL41O60662 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 LINC01311-201ENST00000565162 1445 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 HOXB1-202ENST00000577092 1414 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.49■□□□□ 0.39
KLHL41O60662 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.49■□□□□ 0.39
KLHL41O60662 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.49■□□□□ 0.39
KLHL41O60662 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.49■□□□□ 0.39
KLHL41O60662 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms