Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.04■□□□□ 0.16
SSX4O60224 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.04■□□□□ 0.16
SSX4O60224 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SSX4O60224 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.04■□□□□ 0.16
SSX4O60224 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 HYMAI-201ENST00000635591 3347 ntBASIC16.04■□□□□ 0.16
SSX4O60224 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
SSX4O60224 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSX4O60224 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SSX4O60224 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SSX4O60224 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SSX4O60224 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SSX4O60224 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.03■□□□□ 0.16
SSX4O60224 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.03■□□□□ 0.16
SSX4O60224 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.03■□□□□ 0.16
SSX4O60224 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 PCDHA14-201ENST00000506751 2298 ntBASIC16.03■□□□□ 0.16
SSX4O60224 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.03■□□□□ 0.16
SSX4O60224 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSX4O60224 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.03■□□□□ 0.16
SSX4O60224 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.02■□□□□ 0.16
SSX4O60224 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.02■□□□□ 0.16
SSX4O60224 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 AL356309.3-201ENST00000624132 1934 ntBASIC16.02■□□□□ 0.16
SSX4O60224 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.02■□□□□ 0.16
SSX4O60224 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.02■□□□□ 0.16
SSX4O60224 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SSX4O60224 HCG4P8-203ENST00000443049 980 ntBASIC16.02■□□□□ 0.16
SSX4O60224 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.02■□□□□ 0.16
SSX4O60224 KRT126P-201ENST00000549467 1181 ntBASIC16.02■□□□□ 0.16
SSX4O60224 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.02■□□□□ 0.16
SSX4O60224 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.02■□□□□ 0.16
SSX4O60224 AC069148.1-201ENST00000608741 768 ntBASIC16.02■□□□□ 0.16
SSX4O60224 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.02■□□□□ 0.16
SSX4O60224 AC116407.4-201ENST00000623319 1061 ntBASIC16.02■□□□□ 0.16
SSX4O60224 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SSX4O60224 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSX4O60224 FLJ13224-201ENST00000313737 1514 ntBASIC16.02■□□□□ 0.15
SSX4O60224 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.02■□□□□ 0.15
SSX4O60224 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.02■□□□□ 0.15
SSX4O60224 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SSX4O60224 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.02■□□□□ 0.15
SSX4O60224 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 LINC01311-201ENST00000565162 1445 ntBASIC16.02■□□□□ 0.15
SSX4O60224 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSX4O60224 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX4O60224 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.01■□□□□ 0.15
SSX4O60224 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms