Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACTN4O43707 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.76■□□□□ 0.75
ACTN4O43707 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACTN4O43707 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.76■□□□□ 0.75
ACTN4O43707 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACTN4O43707 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACTN4O43707 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 AC116353.5-201ENST00000638148 1699 ntBASIC19.75■□□□□ 0.75
ACTN4O43707 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.75■□□□□ 0.75
ACTN4O43707 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
ACTN4O43707 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ACTN4O43707 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 SLC25A1P3-201ENST00000395415 828 ntBASIC19.75■□□□□ 0.75
ACTN4O43707 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.75■□□□□ 0.75
ACTN4O43707 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.75■□□□□ 0.75
ACTN4O43707 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.75■□□□□ 0.75
ACTN4O43707 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.75■□□□□ 0.75
ACTN4O43707 AC005336.2-201ENST00000593183 939 ntBASIC19.75■□□□□ 0.75
ACTN4O43707 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.75■□□□□ 0.75
ACTN4O43707 AL592071.1-201ENST00000611956 408 ntBASIC19.75■□□□□ 0.75
ACTN4O43707 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.75■□□□□ 0.75
ACTN4O43707 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.75■□□□□ 0.75
ACTN4O43707 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTN4O43707 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.74■□□□□ 0.75
ACTN4O43707 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 AL136038.3-201ENST00000561909 1096 ntBASIC19.74■□□□□ 0.75
ACTN4O43707 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ACTN4O43707 AC099398.1-201ENST00000567919 2776 ntBASIC19.74■□□□□ 0.75
ACTN4O43707 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 AC125634.1-201ENST00000438758 1403 ntBASIC19.74■□□□□ 0.75
ACTN4O43707 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ACTN4O43707 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTN4O43707 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTN4O43707 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
ACTN4O43707 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.73■□□□□ 0.75
ACTN4O43707 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
ACTN4O43707 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
ACTN4O43707 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.73■□□□□ 0.75
ACTN4O43707 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ACTN4O43707 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.73■□□□□ 0.75
ACTN4O43707 GUSBP12-201ENST00000513727 720 ntBASIC19.73■□□□□ 0.75
ACTN4O43707 AC011498.5-201ENST00000592027 486 ntBASIC19.73■□□□□ 0.75
ACTN4O43707 AL138831.2-201ENST00000606564 490 ntBASIC19.73■□□□□ 0.75
ACTN4O43707 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.73■□□□□ 0.75
ACTN4O43707 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 AL121761.2-201ENST00000598007 1648 ntBASIC19.73■□□□□ 0.75
ACTN4O43707 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTN4O43707 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ACTN4O43707 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.72■□□□□ 0.75
ACTN4O43707 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms