Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC243591.1-201ENST00000452967 1364 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 LINC00304-203ENST00000565008 1864 ntBASIC17.78■□□□□ 0.44
SMAD6O43541 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.77■□□□□ 0.44
SMAD6O43541 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
SMAD6O43541 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SMAD6O43541 PRYP5-201ENST00000451909 266 ntBASIC17.77■□□□□ 0.44
SMAD6O43541 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.77■□□□□ 0.44
SMAD6O43541 STK19B-204ENST00000512515 211 ntBASIC17.77■□□□□ 0.44
SMAD6O43541 OR7E14P-202ENST00000530490 1290 ntBASIC17.77■□□□□ 0.44
SMAD6O43541 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.77■□□□□ 0.44
SMAD6O43541 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.77■□□□□ 0.44
SMAD6O43541 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
SMAD6O43541 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SMAD6O43541 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SMAD6O43541 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD6O43541 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD6O43541 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD6O43541 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SMAD6O43541 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD6O43541 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD6O43541 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
SMAD6O43541 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD6O43541 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD6O43541 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.76■□□□□ 0.43
SMAD6O43541 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.76■□□□□ 0.43
SMAD6O43541 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.76■□□□□ 0.43
SMAD6O43541 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.76■□□□□ 0.43
SMAD6O43541 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.76■□□□□ 0.43
SMAD6O43541 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 AC107918.4-202ENST00000641623 219 ntBASIC17.76■□□□□ 0.43
SMAD6O43541 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SMAD6O43541 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMAD6O43541 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD6O43541 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SMAD6O43541 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD6O43541 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SMAD6O43541 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 AC009336.1-201ENST00000608941 1553 ntBASIC17.75■□□□□ 0.43
SMAD6O43541 AC134043.2-201ENST00000624206 2238 ntBASIC17.75■□□□□ 0.43
SMAD6O43541 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.75■□□□□ 0.43
SMAD6O43541 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 AL590627.1-203ENST00000421194 1026 ntBASIC17.75■□□□□ 0.43
SMAD6O43541 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.75■□□□□ 0.43
SMAD6O43541 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.75■□□□□ 0.43
SMAD6O43541 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.75■□□□□ 0.43
SMAD6O43541 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 AC116407.3-201ENST00000623905 1129 ntBASIC17.75■□□□□ 0.43
SMAD6O43541 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD6O43541 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD6O43541 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms