Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC3O15379 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC3O15379 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HDAC3O15379 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 FLJ38576-201ENST00000623820 2459 ntBASIC17.15■□□□□ 0.34
HDAC3O15379 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
HDAC3O15379 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC3O15379 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC3O15379 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
HDAC3O15379 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.15■□□□□ 0.34
HDAC3O15379 AC024563.2-201ENST00000603282 481 ntBASIC17.15■□□□□ 0.34
HDAC3O15379 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC3O15379 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC3O15379 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.15■□□□□ 0.34
HDAC3O15379 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HDAC3O15379 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HDAC3O15379 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.14■□□□□ 0.33
HDAC3O15379 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 TSPY7P-201ENST00000431358 1114 ntBASIC17.14■□□□□ 0.33
HDAC3O15379 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.14■□□□□ 0.33
HDAC3O15379 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.14■□□□□ 0.33
HDAC3O15379 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC3O15379 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC3O15379 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.14■□□□□ 0.33
HDAC3O15379 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC3O15379 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 AC011270.2-201ENST00000624293 2550 ntBASIC17.14■□□□□ 0.33
HDAC3O15379 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
HDAC3O15379 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC3O15379 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC3O15379 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HDAC3O15379 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC3O15379 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HDAC3O15379 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 AC005915.1-201ENST00000624912 2018 ntBASIC17.13■□□□□ 0.33
HDAC3O15379 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HDAC3O15379 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HDAC3O15379 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC3O15379 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms