Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.33■□□□□ 0.53
TRANK1O15050 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRANK1O15050 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.33■□□□□ 0.53
TRANK1O15050 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRANK1O15050 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.33■□□□□ 0.52
TRANK1O15050 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.33■□□□□ 0.52
TRANK1O15050 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.33■□□□□ 0.52
TRANK1O15050 AC010336.2-201ENST00000564226 506 ntBASIC18.33■□□□□ 0.52
TRANK1O15050 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRANK1O15050 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.33■□□□□ 0.52
TRANK1O15050 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.33■□□□□ 0.52
TRANK1O15050 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 AKAP8P1-201ENST00000434743 1349 ntBASIC18.33■□□□□ 0.52
TRANK1O15050 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 SPTLC1P1-201ENST00000447199 261 ntBASIC18.33■□□□□ 0.52
TRANK1O15050 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRANK1O15050 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.33■□□□□ 0.52
TRANK1O15050 AC026120.1-201ENST00000611536 926 ntBASIC18.33■□□□□ 0.52
TRANK1O15050 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRANK1O15050 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.32■□□□□ 0.52
TRANK1O15050 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRANK1O15050 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 AC073130.3-201ENST00000624389 2278 ntBASIC18.32■□□□□ 0.52
TRANK1O15050 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.32■□□□□ 0.52
TRANK1O15050 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.32■□□□□ 0.52
TRANK1O15050 AC129492.6-201ENST00000611383 1305 ntBASIC18.32■□□□□ 0.52
TRANK1O15050 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.32■□□□□ 0.52
TRANK1O15050 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.32■□□□□ 0.52
TRANK1O15050 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 AL662799.1-202ENST00000614205 422 ntBASIC18.32■□□□□ 0.52
TRANK1O15050 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.32■□□□□ 0.52
TRANK1O15050 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRANK1O15050 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.32■□□□□ 0.52
TRANK1O15050 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 AC022494.1-201ENST00000466044 728 ntBASIC18.31■□□□□ 0.52
TRANK1O15050 AC004890.2-204ENST00000481968 304 ntBASIC18.31■□□□□ 0.52
TRANK1O15050 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.31■□□□□ 0.52
TRANK1O15050 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 ATP5G2P4-201ENST00000442175 420 ntBASIC18.31■□□□□ 0.52
TRANK1O15050 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.31■□□□□ 0.52
TRANK1O15050 AL132655.2-201ENST00000596276 594 ntBASIC18.31■□□□□ 0.52
TRANK1O15050 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 CU639417.3-201ENST00000624240 1404 ntBASIC18.31■□□□□ 0.52
TRANK1O15050 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
TRANK1O15050 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRANK1O15050 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRANK1O15050 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
TRANK1O15050 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.3■□□□□ 0.52
TRANK1O15050 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRANK1O15050 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 U91328.1-201ENST00000437528 223 ntBASIC18.3■□□□□ 0.52
TRANK1O15050 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.3■□□□□ 0.52
TRANK1O15050 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.3■□□□□ 0.52
TRANK1O15050 AC005237.2-201ENST00000434368 219 ntBASIC18.3■□□□□ 0.52
TRANK1O15050 SPDYE14P-201ENST00000442619 822 ntBASIC18.3■□□□□ 0.52
TRANK1O15050 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.3■□□□□ 0.52
TRANK1O15050 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.3■□□□□ 0.52
TRANK1O15050 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRANK1O15050 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.3■□□□□ 0.52
TRANK1O15050 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms