Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SIRPAP1-201ENST00000448467 1770 ntBASIC17.17■□□□□ 0.34
C4orf47A7E2U8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 AC148477.5-201ENST00000625164 1645 ntBASIC17.17■□□□□ 0.34
C4orf47A7E2U8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 AC063926.2-201ENST00000623766 1308 ntBASIC17.17■□□□□ 0.34
C4orf47A7E2U8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C4orf47A7E2U8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 AC092902.6-201ENST00000641783 218 ntBASIC17.16■□□□□ 0.34
C4orf47A7E2U8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 AC132938.6-201ENST00000623828 1655 ntBASIC17.16■□□□□ 0.34
C4orf47A7E2U8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C4orf47A7E2U8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AC015922.1-201ENST00000421102 1152 ntBASIC17.15■□□□□ 0.34
C4orf47A7E2U8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.15■□□□□ 0.34
C4orf47A7E2U8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 RNA5SP421-201ENST00000516864 134 ntBASIC17.15■□□□□ 0.34
C4orf47A7E2U8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AC023141.13-201ENST00000604991 943 ntBASIC17.15■□□□□ 0.34
C4orf47A7E2U8 AL805961.1-202ENST00000641562 540 ntBASIC17.15■□□□□ 0.34
C4orf47A7E2U8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C4orf47A7E2U8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C4orf47A7E2U8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
C4orf47A7E2U8 AC132938.5-201ENST00000624980 1813 ntBASIC17.14■□□□□ 0.34
C4orf47A7E2U8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
C4orf47A7E2U8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.14■□□□□ 0.33
C4orf47A7E2U8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms