Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KRT18P29-201ENST00000397031 1267 ntBASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TMEM235A6NFC5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 MIR4651-201ENST00000582622 73 ntBASIC15.07■□□□□ 0
TMEM235A6NFC5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.07■□□□□ 0
TMEM235A6NFC5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 FLJ38576-201ENST00000623820 2459 ntBASIC15.07■□□□□ 0
TMEM235A6NFC5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.07■□□□□ 0
TMEM235A6NFC5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TMEM235A6NFC5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TMEM235A6NFC5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.07■□□□□ 0
TMEM235A6NFC5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM235A6NFC5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.06■□□□□ 0
TMEM235A6NFC5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.06■□□□□ 0
TMEM235A6NFC5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 AC046158.3-201ENST00000624947 2558 ntBASIC15.06■□□□□ 0
TMEM235A6NFC5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.06■□□□□ 0
TMEM235A6NFC5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.06■□□□□ 0
TMEM235A6NFC5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.06■□□□□ 0
TMEM235A6NFC5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 DDX43P3-201ENST00000441064 443 ntBASIC15.06■□□□□ 0
TMEM235A6NFC5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.06■□□□□ 0
TMEM235A6NFC5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.06■□□□□ 0
TMEM235A6NFC5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.06■□□□□ 0
TMEM235A6NFC5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.06■□□□□ 0
TMEM235A6NFC5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.06■□□□□ 0
TMEM235A6NFC5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 AC092338.2-201ENST00000568827 1415 ntBASIC15.06■□□□□ 0
TMEM235A6NFC5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM235A6NFC5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.06■□□□□ 0
TMEM235A6NFC5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMEM235A6NFC5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
TMEM235A6NFC5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.05■□□□□ 0
TMEM235A6NFC5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM235A6NFC5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TMEM235A6NFC5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEM235A6NFC5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEM235A6NFC5 AL355355.2-201ENST00000442321 338 ntBASIC15.05■□□□□ -0
TMEM235A6NFC5 CCR12P-201ENST00000446203 998 ntBASIC15.05■□□□□ -0
TMEM235A6NFC5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.05■□□□□ -0
TMEM235A6NFC5 SEC1P-202ENST00000473944 940 ntBASIC15.05■□□□□ -0
TMEM235A6NFC5 BX088651.1-201ENST00000540551 451 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms