Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 CR769767.2-201ENST00000622735 460 ntBASIC19.14■□□□□ 0.65
CCDC66A2RUB6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 PP12613-201ENST00000424958 2230 ntBASIC19.14■□□□□ 0.65
CCDC66A2RUB6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC66A2RUB6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC66A2RUB6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 AP003071.4-201ENST00000562276 1284 ntBASIC19.12■□□□□ 0.65
CCDC66A2RUB6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 MIR3180-4-201ENST00000582223 153 ntBASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC66A2RUB6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms