Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCDC189A1A4V9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 LINC01568-207ENST00000641790 1380 ntBASIC17.7■□□□□ 0.42
CCDC189A1A4V9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC189A1A4V9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 TSPY15P-201ENST00000457163 923 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC145285.6-201ENST00000604632 637 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AL138966.2-201ENST00000621997 464 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC141257.4-201ENST00000634557 245 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC136944.6-201ENST00000634818 245 ntBASIC17.69■□□□□ 0.42
CCDC189A1A4V9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC189A1A4V9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC189A1A4V9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms