Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 AL592071.1-201ENST00000611956 408 ntBASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP46A1Q9Y6A2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.91■□□□□ 0.94
CYP46A1Q9Y6A2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 AL031133.1-201ENST00000406807 723 ntBASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 AC090616.6-201ENST00000582640 721 ntBASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 AL353801.3-201ENST00000609898 542 ntBASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 IGHV3-41-201ENST00000613121 348 ntBASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP46A1Q9Y6A2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CYP46A1Q9Y6A2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CYP46A1Q9Y6A2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CYP46A1Q9Y6A2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CYP46A1Q9Y6A2 PRORSD1P-202ENST00000563365 2154 ntBASIC20.89■□□□□ 0.94
CYP46A1Q9Y6A2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 AC007967.3-201ENST00000434308 558 ntBASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 KRT8P26-201ENST00000534154 1276 ntBASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.89■□□□□ 0.93
CYP46A1Q9Y6A2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms