Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 AC109462.3-201ENST00000573934 613 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 AC019129.2-201ENST00000609837 1235 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 TP73-AS1-207ENST00000624167 988 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 KRT8P10-201ENST00000450021 1447 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 PMPCAP1-201ENST00000508114 1576 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 AC006116.8-202ENST00000587620 1550 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 AC008764.6-201ENST00000595909 2069 ntBASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNX9Q9Y5X1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 AP002469.2-201ENST00000531724 424 ntBASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.87■□□□□ 0.61
SNX9Q9Y5X1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 AC009078.2-202ENST00000463353 338 ntBASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 AC073592.5-201ENST00000624854 528 ntBASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.86■□□□□ 0.61
SNX9Q9Y5X1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 AL353593.2-201ENST00000602529 1483 ntBASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 FAM197Y8-203ENST00000450145 560 ntBASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms