Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 OR6D1P-202ENST00000641007 5290 ntBASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF11Q9Y3C5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 AC005332.3-201ENST00000589904 676 ntBASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 GPR32P1-201ENST00000601788 811 ntBASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF11Q9Y3C5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 RCN1P1-201ENST00000400413 996 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 DDX43P3-201ENST00000441064 443 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 SPDYE13P-201ENST00000445314 798 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 AC063952.2-201ENST00000498792 1227 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 RNF126P1-202ENST00000569893 925 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 RN7SL850P-201ENST00000579959 291 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 HLA-J-201ENST00000462773 1622 ntBASIC17.21■□□□□ 0.35
RNF11Q9Y3C5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF11Q9Y3C5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF11Q9Y3C5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF11Q9Y3C5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms