Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SSX2IPQ9Y2D8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 AC104581.1-202ENST00000635932 2618 ntBASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 LAGE3P1-201ENST00000425356 484 ntBASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 AC103564.2-201ENST00000432853 1299 ntBASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 AC098831.1-202ENST00000438821 336 ntBASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 Z83851.2-201ENST00000609564 659 ntBASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSX2IPQ9Y2D8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSX2IPQ9Y2D8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 AC079776.2-201ENST00000641154 1609 ntBASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 MED15P5-201ENST00000423150 992 ntBASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 PGM5P2-202ENST00000637225 1043 ntBASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 AL022326.1-202ENST00000641533 845 ntBASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.94■□□□□ 0.62
SSX2IPQ9Y2D8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms