Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 LINC00602-201ENST00000629776 2065 ntBASIC16.65■□□□□ 0.26
RNF6Q9Y252 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
RNF6Q9Y252 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF6Q9Y252 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF6Q9Y252 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
RNF6Q9Y252 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
RNF6Q9Y252 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF6Q9Y252 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 PRELID1P1-202ENST00000567272 903 ntBASIC16.64■□□□□ 0.25
RNF6Q9Y252 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 KRT18P55-202ENST00000578578 1546 ntBASIC16.64■□□□□ 0.25
RNF6Q9Y252 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF6Q9Y252 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 AL109659.2-201ENST00000606809 1674 ntBASIC16.63■□□□□ 0.25
RNF6Q9Y252 AL139384.1-201ENST00000612143 3047 ntBASIC16.63■□□□□ 0.25
RNF6Q9Y252 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 AP000593.1-201ENST00000393668 712 ntBASIC16.63■□□□□ 0.25
RNF6Q9Y252 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 SEC1P-202ENST00000473944 940 ntBASIC16.63■□□□□ 0.25
RNF6Q9Y252 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
RNF6Q9Y252 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms