Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 TFAMP1-201ENST00000412727 736 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 TSPY16P-201ENST00000449843 468 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 AC109322.1-201ENST00000524499 1264 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 RN7SL204P-201ENST00000582831 262 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 AL357033.4-201ENST00000617703 1807 ntBASIC16.68■□□□□ 0.26
LHX6Q9UPM6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.68■□□□□ 0.26
LHX6Q9UPM6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 AC106820.2-201ENST00000563775 3264 ntBASIC16.67■□□□□ 0.26
LHX6Q9UPM6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 PDPK2P-202ENST00000562415 1191 ntBASIC16.67■□□□□ 0.26
LHX6Q9UPM6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 AC027281.2-201ENST00000623856 713 ntBASIC16.67■□□□□ 0.26
LHX6Q9UPM6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX6Q9UPM6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AC073621.1-201ENST00000392730 636 ntBASIC16.66■□□□□ 0.26
LHX6Q9UPM6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 FAM58CP-201ENST00000435741 640 ntBASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 AC093484.2-201ENST00000580996 2166 ntBASIC16.66■□□□□ 0.26
LHX6Q9UPM6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 MIR6799-201ENST00000620297 69 ntBASIC16.66■□□□□ 0.26
LHX6Q9UPM6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX6Q9UPM6 LINC00628-201ENST00000628516 1289 ntBASIC16.66■□□□□ 0.26
LHX6Q9UPM6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms