Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 KRT18P2-201ENST00000447938 1258 ntBASIC17.73■□□□□ 0.43
MBD1Q9UIS9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 MIR1199-201ENST00000621445 119 ntBASIC17.73■□□□□ 0.43
MBD1Q9UIS9 AC005593.1-201ENST00000624894 515 ntBASIC17.73■□□□□ 0.43
MBD1Q9UIS9 AC079781.4-201ENST00000641908 219 ntBASIC17.73■□□□□ 0.43
MBD1Q9UIS9 KRT8P47-201ENST00000604727 1398 ntBASIC17.73■□□□□ 0.43
MBD1Q9UIS9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD1Q9UIS9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 DNAJB3-202ENST00000449667 1266 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 PRYP5-201ENST00000451909 266 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 AC108751.1-201ENST00000490852 363 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 AC122714.2-201ENST00000502787 707 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 AC006557.2-201ENST00000592985 1240 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MTDHP5-201ENST00000598980 586 ntBASIC17.72■□□□□ 0.43
MBD1Q9UIS9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD1Q9UIS9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 SPDYE21P-201ENST00000413323 827 ntBASIC17.71■□□□□ 0.43
MBD1Q9UIS9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 FLJ13224-201ENST00000313737 1514 ntBASIC17.71■□□□□ 0.43
MBD1Q9UIS9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MBD1Q9UIS9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
MBD1Q9UIS9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD1Q9UIS9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms