Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 AC009947.1-201ENST00000444350 727 ntBASIC17.95■□□□□ 0.46
EBF1Q9UH73 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 PGM5P2-202ENST00000637225 1043 ntBASIC17.95■□□□□ 0.46
EBF1Q9UH73 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EBF1Q9UH73 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.95■□□□□ 0.46
EBF1Q9UH73 WIZP1-201ENST00000531444 2299 ntBASIC17.95■□□□□ 0.46
EBF1Q9UH73 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 MTDHP5-201ENST00000598980 586 ntBASIC17.94■□□□□ 0.46
EBF1Q9UH73 AL355385.1-201ENST00000606123 409 ntBASIC17.94■□□□□ 0.46
EBF1Q9UH73 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 AC073592.4-201ENST00000623827 446 ntBASIC17.94■□□□□ 0.46
EBF1Q9UH73 AL022326.1-202ENST00000641533 845 ntBASIC17.94■□□□□ 0.46
EBF1Q9UH73 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
EBF1Q9UH73 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EBF1Q9UH73 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.93■□□□□ 0.46
EBF1Q9UH73 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AC007967.3-201ENST00000434308 558 ntBASIC17.93■□□□□ 0.46
EBF1Q9UH73 PRYP5-201ENST00000451909 266 ntBASIC17.93■□□□□ 0.46
EBF1Q9UH73 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 AC134684.3-201ENST00000641758 218 ntBASIC17.93■□□□□ 0.46
EBF1Q9UH73 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EBF1Q9UH73 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
EBF1Q9UH73 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EBF1Q9UH73 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF1Q9UH73 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 GMCL1P1-201ENST00000463439 1581 ntBASIC17.92■□□□□ 0.46
EBF1Q9UH73 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.92■□□□□ 0.46
EBF1Q9UH73 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
EBF1Q9UH73 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EBF1Q9UH73 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms