Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC140658.5-201ENST00000438532 169 ntBASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.6
SLC52A1Q9NWF4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC25.01■■□□□ 1.6
SLC52A1Q9NWF4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 AL020996.1-203ENST00000536896 2307 ntBASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 AC087163.2-201ENST00000457299 853 ntBASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 AC138761.1-201ENST00000584393 385 ntBASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC52A1Q9NWF4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 AC092474.2-201ENST00000424288 719 ntBASIC25■■□□□ 1.59
SLC52A1Q9NWF4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 MIR4745-201ENST00000577608 62 ntBASIC25■■□□□ 1.59
SLC52A1Q9NWF4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 AJ011932.1-201ENST00000621707 465 ntBASIC25■■□□□ 1.59
SLC52A1Q9NWF4 AL645728.2-201ENST00000641974 660 ntBASIC25■■□□□ 1.59
SLC52A1Q9NWF4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 KRT18P55-202ENST00000578578 1546 ntBASIC25■■□□□ 1.59
SLC52A1Q9NWF4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC52A1Q9NWF4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AL671277.1-201ENST00000429656 993 ntBASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 TIMM8BP1-201ENST00000452384 211 ntBASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AL512356.2-201ENST00000546955 174 ntBASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLC52A1Q9NWF4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 KRT8P48-201ENST00000515599 1220 ntBASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 RNA5SP421-201ENST00000516864 134 ntBASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 AC046185.3-201ENST00000623228 1824 ntBASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.98■■□□□ 1.59
SLC52A1Q9NWF4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLC52A1Q9NWF4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SLC52A1Q9NWF4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLC52A1Q9NWF4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLC52A1Q9NWF4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SLC52A1Q9NWF4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms