Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHD8Q9HCK8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 CASP16P-204ENST00000635032 809 ntBASIC16.21■□□□□ 0.18
CHD8Q9HCK8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHD8Q9HCK8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AC125437.2-201ENST00000625180 2167 ntBASIC16.2■□□□□ 0.18
CHD8Q9HCK8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AP005482.1-201ENST00000563722 1273 ntBASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AC008494.3-201ENST00000606615 944 ntBASIC16.2■□□□□ 0.18
CHD8Q9HCK8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CHD8Q9HCK8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 AC008735.3-201ENST00000596646 500 ntBASIC16.19■□□□□ 0.18
CHD8Q9HCK8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD8Q9HCK8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 BNIP3P42-201ENST00000454982 569 ntBASIC16.18■□□□□ 0.18
CHD8Q9HCK8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 BNIP3P29-201ENST00000598302 571 ntBASIC16.18■□□□□ 0.18
CHD8Q9HCK8 AC011447.5-201ENST00000616168 564 ntBASIC16.18■□□□□ 0.18
CHD8Q9HCK8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 WASH6P-202ENST00000359512 1437 ntBASIC16.18■□□□□ 0.18
CHD8Q9HCK8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD8Q9HCK8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms