Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 GPR32P1-201ENST00000601788 811 ntBASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRTM1Q9HBL6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 AC005521.1-201ENST00000393351 872 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 AC005104.2-201ENST00000427818 678 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MTCL1P1-201ENST00000446207 792 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 HOMER2P1-201ENST00000455653 964 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 OR6D1P-203ENST00000641209 4860 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 AC022211.2-201ENST00000585075 2527 ntBASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRTM1Q9HBL6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 HBZP1-201ENST00000354915 429 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 RNF152P1-201ENST00000397754 604 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 TSPY5P-201ENST00000426936 936 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 KRT18P38-201ENST00000449496 1282 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AL359075.1-203ENST00000462729 1002 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC068472.1-201ENST00000474589 881 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC010331.1-201ENST00000611423 582 ntBASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRTM1Q9HBL6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRTM1Q9HBL6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms