Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4AQ9H788 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH2D4AQ9H788 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 AC073621.1-201ENST00000392730 636 ntBASIC20.51■□□□□ 0.87
SH2D4AQ9H788 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.51■□□□□ 0.87
SH2D4AQ9H788 AC002558.1-201ENST00000488906 803 ntBASIC20.51■□□□□ 0.87
SH2D4AQ9H788 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 STK25P1-201ENST00000585406 838 ntBASIC20.51■□□□□ 0.87
SH2D4AQ9H788 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.51■□□□□ 0.87
SH2D4AQ9H788 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D4AQ9H788 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 FLJ13224-201ENST00000313737 1514 ntBASIC20.5■□□□□ 0.87
SH2D4AQ9H788 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 MYCLP1-201ENST00000372451 1075 ntBASIC20.5■□□□□ 0.87
SH2D4AQ9H788 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 KRT18P3-201ENST00000451602 1288 ntBASIC20.5■□□□□ 0.87
SH2D4AQ9H788 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.5■□□□□ 0.87
SH2D4AQ9H788 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 AC004706.3-202ENST00000621574 984 ntBASIC20.5■□□□□ 0.87
SH2D4AQ9H788 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D4AQ9H788 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 AC009947.1-201ENST00000444350 727 ntBASIC20.49■□□□□ 0.87
SH2D4AQ9H788 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 STK19B-204ENST00000512515 211 ntBASIC20.49■□□□□ 0.87
SH2D4AQ9H788 RNA5SP416-201ENST00000516838 111 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms