Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 BX842568.4-201ENST00000421222 227 ntBASIC20.89■□□□□ 0.93
NBPF3Q9H094 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 TERC-201ENST00000602385 541 ntBASIC20.89■□□□□ 0.93
NBPF3Q9H094 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 GNAS-203ENST00000306120 1878 ntBASIC20.89■□□□□ 0.93
NBPF3Q9H094 AC132938.5-201ENST00000624980 1813 ntBASIC20.89■□□□□ 0.93
NBPF3Q9H094 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 PMPCAP1-201ENST00000508114 1576 ntBASIC20.89■□□□□ 0.93
NBPF3Q9H094 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 AC005332.8-201ENST00000622750 2735 ntBASIC20.88■□□□□ 0.93
NBPF3Q9H094 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 ABCD1P5-201ENST00000445663 754 ntBASIC20.88■□□□□ 0.93
NBPF3Q9H094 AC093909.1-201ENST00000504731 1122 ntBASIC20.88■□□□□ 0.93
NBPF3Q9H094 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 AC109462.3-201ENST00000573934 613 ntBASIC20.88■□□□□ 0.93
NBPF3Q9H094 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NBPF3Q9H094 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
NBPF3Q9H094 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 LINC00896-202ENST00000609602 2128 ntBASIC20.87■□□□□ 0.93
NBPF3Q9H094 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
NBPF3Q9H094 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NBPF3Q9H094 AP005117.1-201ENST00000584346 1413 ntBASIC20.87■□□□□ 0.93
NBPF3Q9H094 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 KRT18P67-201ENST00000432816 1264 ntBASIC20.86■□□□□ 0.93
NBPF3Q9H094 AF186996.4-201ENST00000467186 377 ntBASIC20.86■□□□□ 0.93
NBPF3Q9H094 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 PP12613-201ENST00000424958 2230 ntBASIC20.86■□□□□ 0.93
NBPF3Q9H094 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 AC133963.1-201ENST00000504166 1679 ntBASIC20.86■□□□□ 0.93
NBPF3Q9H094 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.86■□□□□ 0.93
NBPF3Q9H094 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NBPF3Q9H094 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms