Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL022326.1-202ENST00000641533 845 ntBASIC18.47■□□□□ 0.55
SMOQ99835 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SMOQ99835 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.46■□□□□ 0.55
SMOQ99835 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SMOQ99835 HLA-J-201ENST00000462773 1622 ntBASIC18.46■□□□□ 0.55
SMOQ99835 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SMOQ99835 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 MYCLP1-201ENST00000372451 1075 ntBASIC18.46■□□□□ 0.55
SMOQ99835 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.46■□□□□ 0.55
SMOQ99835 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.46■□□□□ 0.55
SMOQ99835 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.46■□□□□ 0.55
SMOQ99835 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.46■□□□□ 0.55
SMOQ99835 AC064862.7-201ENST00000604520 867 ntBASIC18.46■□□□□ 0.55
SMOQ99835 FAM215A-202ENST00000632077 792 ntBASIC18.46■□□□□ 0.55
SMOQ99835 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.46■□□□□ 0.55
SMOQ99835 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
SMOQ99835 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.46■□□□□ 0.55
SMOQ99835 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 AC009336.1-201ENST00000608941 1553 ntBASIC18.46■□□□□ 0.55
SMOQ99835 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMOQ99835 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMOQ99835 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.45■□□□□ 0.54
SMOQ99835 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SMOQ99835 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.45■□□□□ 0.54
SMOQ99835 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.45■□□□□ 0.54
SMOQ99835 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.45■□□□□ 0.54
SMOQ99835 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.45■□□□□ 0.54
SMOQ99835 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMOQ99835 AC067852.2-201ENST00000590513 2313 ntBASIC18.45■□□□□ 0.54
SMOQ99835 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMOQ99835 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SMOQ99835 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 AC133963.1-201ENST00000504166 1679 ntBASIC18.44■□□□□ 0.54
SMOQ99835 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SMOQ99835 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMOQ99835 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.44■□□□□ 0.54
SMOQ99835 AP001005.1-201ENST00000571755 1248 ntBASIC18.44■□□□□ 0.54
SMOQ99835 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.44■□□□□ 0.54
SMOQ99835 MIR7706-201ENST00000613747 67 ntBASIC18.44■□□□□ 0.54
SMOQ99835 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.44■□□□□ 0.54
SMOQ99835 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.44■□□□□ 0.54
SMOQ99835 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMOQ99835 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMOQ99835 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMOQ99835 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMOQ99835 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms